Knowledge base for genomic medicine in Japanese
リンチ症候群
腫瘍性疾患
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TypeNameGene SymbolClinical SignificanceChromosomeStartStopReference AlleleAlternate AlleleReview StatusOther IDs
(GRCh37)
DeletionNM_000535.7(PMS2):c.240del (p.Phe80fs)PMS2Pathogenic760436136043613CGCcriteria provided, single submitterClinGen:CA658657656
DeletionNM_000535.7(PMS2):c.1181del (p.Lys394fs)PMS2Pathogenic760272156027215CTCcriteria provided, multiple submitters, no conflictsClinGen:CA658655983
single nucleotide variantNM_000535.7(PMS2):c.164-1G>APMS2Likely pathogenic760436906043690CTcriteria provided, multiple submitters, no conflictsClinGen:CA044881
InsertionNM_000535.7(PMS2):c.162_163insAATT (p.Asp55delinsAsnTer)PMS2Pathogenic760455236045524CCAATTcriteria provided, multiple submitters, no conflictsClinGen:CA658657658
IndelNM_000535.7(PMS2):c.922_933delinsA (p.Glu308fs)PMS2Pathogenic/Likely pathogenic760316596031670GTGGTAGACCTCTcriteria provided, multiple submitters, no conflictsClinGen:CA658655992
single nucleotide variantNM_000535.7(PMS2):c.535A>T (p.Lys179Ter)PMS2Pathogenic760420866042086TAcriteria provided, single submitterClinGen:CA366744151
single nucleotide variantNM_000535.7(PMS2):c.383C>A (p.Ser128Ter)PMS2Pathogenic760422386042238GTcriteria provided, single submitterClinGen:CA366744457
DuplicationNM_000179.3(MSH6):c.125_132dup (p.Gly45fs)MSH6Pathogenic/Likely pathogenic24801049648010497CCCTTCCCCAcriteria provided, multiple submitters, no conflictsClinGen:CA658657035
DeletionNM_000179.3(MSH6):c.3757_3767del (p.Val1253fs)MSH6Likely pathogenic24803344948033459CATTAGTAGAAGCcriteria provided, single submitterClinGen:CA658655736
DeletionNM_000249.4(MLH1):c.325del (p.His109fs)MLH1Pathogenic/Likely pathogenic33704590937045909GCGcriteria provided, multiple submitters, no conflictsClinGen:CA658655767