Knowledge base for genomic medicine in Japanese
リンチ症候群
腫瘍性疾患
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TypeNameGene SymbolClinical SignificanceChromosomeStartStopReference AlleleAlternate AlleleReview StatusOther IDs
(GRCh37)
DeletionNM_000535.7(PMS2):c.1425_1428del (p.Ser476fs)PMS2Pathogenic760269686026971AACTCAcriteria provided, multiple submitters, no conflictsClinGen:CA658655977
DeletionNM_000535.7(PMS2):c.1164del (p.His388fs)PMS2Pathogenic760272326027232CACcriteria provided, multiple submitters, no conflictsClinGen:CA658655984
single nucleotide variantNM_000535.7(PMS2):c.1345C>T (p.Gln449Ter)PMS2Pathogenic760270516027051GAcriteria provided, multiple submitters, no conflictsClinGen:CA366742291
DuplicationNM_000535.7(PMS2):c.1196dup (p.Gln400fs)PMS2Pathogenic760271996027200CCTcriteria provided, multiple submitters, no conflictsClinGen:CA658655982
single nucleotide variantNM_000535.7(PMS2):c.2413C>T (p.Gln805Ter)PMS2Pathogenic760172516017251GAcriteria provided, multiple submitters, no conflictsClinGen:CA366735640
single nucleotide variantNM_000535.7(PMS2):c.803+5G>APMS2Likely pathogenic760369526036952CTcriteria provided, multiple submitters, no conflictsClinGen:CA153239468
DuplicationNM_000535.7(PMS2):c.119_122dup (p.Leu42fs)PMS2Pathogenic760455636045564CCTCCTcriteria provided, single submitterClinGen:CA658657659
single nucleotide variantNM_000535.7(PMS2):c.904-2A>CPMS2Likely pathogenic760316906031690TGcriteria provided, single submitterClinGen:CA366743230
single nucleotide variantNM_000535.7(PMS2):c.220G>C (p.Gly74Arg)PMS2Pathogenic/Likely pathogenic760436336043633CGcriteria provided, multiple submitters, no conflictsClinGen:CA366744819
IndelNM_000535.7(PMS2):c.1408delinsGTCTTCTAGCACTTCAGGTGCCATCTCTGACAAAGGCGTCCTGAGAT (p.Pro470delinsValPheTer)PMS2Pathogenic760269886026988GATCTCAGGACGCCTTTGTCAGAGATGGCACCTGAAGTGCTAGAAGACcriteria provided, single submitterClinGen:CA658655978