Knowledge base for genomic medicine in Japanese
リンチ症候群
腫瘍性疾患
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TypeNameGene SymbolClinical SignificanceChromosomeStartStopReference AlleleAlternate AlleleReview StatusOther IDs
(GRCh37)
single nucleotide variantNM_000535.7(PMS2):c.2192T>G (p.Leu731Ter)PMS2Pathogenic760183106018310ACcriteria provided, multiple submitters, no conflictsClinGen:CA16612382
single nucleotide variantNM_000535.7(PMS2):c.1891C>T (p.Gln631Ter)PMS2Pathogenic760265056026505GAcriteria provided, multiple submitters, no conflictsClinGen:CA16612391
DeletionNM_000251.3(MSH2):c.39_48del (p.Ser13fs)MSH2Pathogenic24763036647630375AGAGCGCGGCCAcriteria provided, single submitterClinGen:CA16617544
DeletionNM_000251.3(MSH2):c.792+1delMSH2Pathogenic/Likely pathogenic24763969947639699AGAcriteria provided, multiple submitters, no conflictsClinGen:CA16617564
InsertionNM_000251.3(MSH2):c.806_807insTGTACCGCAGATT (p.Leu270fs)MSH2Pathogenic24764142147641422CCTGTACCGCAGATTcriteria provided, multiple submitters, no conflictsClinGen:CA16617565
DeletionNM_000251.3(MSH2):c.871del (p.Glu290_Leu291insTer)MSH2Pathogenic24764148647641486ACAcriteria provided, multiple submitters, no conflictsClinGen:CA16617566
DuplicationNM_000251.3(MSH2):c.876dup (p.Thr293fs)MSH2Pathogenic24764149047641491CCTcriteria provided, multiple submitters, no conflictsClinGen:CA16617567
DeletionNM_000251.3(MSH2):c.928del (p.Asn311fs)MSH2Pathogenic/Likely pathogenic24764154147641541GCGcriteria provided, multiple submitters, no conflictsClinGen:CA16617569
single nucleotide variantNM_000251.3(MSH2):c.1045C>A (p.Pro349Thr)MSH2Likely pathogenic24764353747643537CAcriteria provided, single submitterClinGen:CA16617573
single nucleotide variantNM_000251.3(MSH2):c.1465G>T (p.Glu489Ter)MSH2Pathogenic24769024847690248GTcriteria provided, multiple submitters, no conflictsClinGen:CA16617580