Knowledge base for genomic medicine in Japanese
リンチ症候群
腫瘍性疾患
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TypeNameGene SymbolClinical SignificanceChromosomeStartStopReference AlleleAlternate AlleleReview StatusOther IDs
(GRCh37)
single nucleotide variantNM_000535.7(PMS2):c.353+2T>CPMS2Pathogenic/Likely pathogenic760433196043319AGcriteria provided, multiple submitters, no conflictsClinGen:CA049344
DeletionNC_000007.14:g.(?_5991973)_(6002636_?)delPMS2Pathogenic760316046042267nanacriteria provided, single submitter-
DeletionNC_000007.14:g.(?_6003690)_(6004058_?)delPMS2Pathogenic760433216043689nanacriteria provided, single submitter-
DeletionNM_000535.7(PMS2):c.1864_1865del (p.Met622fs)PMS2Pathogenic760265316026532CATCcriteria provided, multiple submitters, no conflictsClinGen:CA16612214
single nucleotide variantNM_000535.7(PMS2):c.538-2A>GPMS2Pathogenic/Likely pathogenic760389086038908TCcriteria provided, multiple submitters, no conflictsClinGen:CA050225
single nucleotide variantNM_000535.7(PMS2):c.1912C>T (p.Gln638Ter)PMS2Pathogenic760264846026484GAcriteria provided, multiple submitters, no conflictsClinGen:CA16612252
single nucleotide variantNM_000535.7(PMS2):c.1653C>A (p.Cys551Ter)PMS2Pathogenic760267436026743GTcriteria provided, multiple submitters, no conflictsClinGen:CA16612257
DuplicationNM_000535.7(PMS2):c.859dup (p.Arg287fs)PMS2Pathogenic760352086035209CCTcriteria provided, multiple submitters, no conflictsClinGen:CA16612270
IndelNM_000535.7(PMS2):c.779_780delinsAG (p.Ser260Ter)PMS2Pathogenic760369806036981GGCTcriteria provided, single submitterClinGen:CA16612273
DeletionNM_000535.7(PMS2):c.129del (p.Glu44fs)PMS2Pathogenic760455576045557CTCcriteria provided, multiple submitters, no conflictsClinGen:CA16612290