single nucleotide variant | NM_004937.3(CTNS):c.473T>C (p.Leu158Pro) | CTNS | Pathogenic/Likely pathogenic | 17 | 3559792 | 3559792 | T | C | criteria provided, multiple submitters, no conflicts | ClinGen:CA342075,UniProtKB:O60931#VAR_010680 |
Deletion | NM_004937.3(CTNS):c.198_218del (p.Ile67_Pro73del) | CTNS | Pathogenic/Likely pathogenic | 17 | 3552198 | 3552218 | ATATTACTATCCTTGAGCTCCC | A | criteria provided, multiple submitters, no conflicts | ClinGen:CA342073 |
single nucleotide variant | NM_004937.3(CTNS):c.416C>T (p.Ser139Phe) | CTNS | Pathogenic/Likely pathogenic | 17 | 3558601 | 3558601 | C | T | criteria provided, multiple submitters, no conflicts | ClinGen:CA116861,UniProtKB:O60931#VAR_010678,OMIM:606272.0018 |
single nucleotide variant | NM_004937.3(CTNS):c.589G>A (p.Gly197Arg) | CTNS | Pathogenic/Likely pathogenic | 17 | 3559997 | 3559997 | G | A | criteria provided, multiple submitters, no conflicts | ClinGen:CA278463,UniProtKB:O60931#VAR_010682,OMIM:606272.0011 |
single nucleotide variant | NM_004937.3(CTNS):c.62-1G>A | CTNS | Pathogenic | 17 | 3550737 | 3550737 | G | A | criteria provided, single submitter | - |
Deletion | NC_000017.11:g.(?_3636418)_(3658185_?)del | CTNS | Pathogenic | 17 | 3539712 | 3561479 | na | na | criteria provided, single submitter | - |
Deletion | NC_000017.11:g.(?_3657995)_(3660744_?)del | CTNS | Pathogenic | 17 | 3561289 | 3564038 | na | na | criteria provided, single submitter | - |
Deletion | NC_000017.11:g.(?_3647424)_(3648951_?)del | CTNS | Pathogenic | 17 | 3550718 | 3552245 | na | na | criteria provided, single submitter | - |
single nucleotide variant | NM_004937.3(CTNS):c.140+1G>T | CTNS | Pathogenic | 17 | 3550817 | 3550817 | G | T | criteria provided, single submitter | - |
Deletion | NC_000017.11:g.(?_3647434)_(3648941_?)del | CTNS | Pathogenic | 17 | 3550728 | 3552235 | na | na | criteria provided, single submitter | - |