single nucleotide variant | NM_004937.3(CTNS):c.451A>G (p.Arg151Gly) | CTNS | Likely pathogenic | 17 | 3558636 | 3558636 | A | G | criteria provided, single submitter | - |
single nucleotide variant | NM_004937.3(CTNS):c.853-1G>A | CTNS | Likely pathogenic | 17 | 3563151 | 3563151 | G | A | criteria provided, single submitter | - |
Duplication | NM_004937.3(CTNS):c.869dup (p.Tyr290Ter) | CTNS | Likely pathogenic | 17 | 3563167 | 3563168 | T | TA | criteria provided, single submitter | - |
Duplication | NM_004937.3(CTNS):c.971-1dup | CTNS | Likely pathogenic | 17 | 3563528 | 3563529 | A | AG | criteria provided, single submitter | - |
Deletion | NM_004937.3(CTNS):c.562-2_562-1del | CTNS | Likely pathogenic | 17 | 3559968 | 3559969 | CAG | C | criteria provided, single submitter | - |
Deletion | NM_004937.3(CTNS):c.423del (p.Phe142fs) | CTNS | Likely pathogenic | 17 | 3558607 | 3558607 | TC | T | criteria provided, single submitter | - |
single nucleotide variant | NM_004937.3(CTNS):c.414G>A (p.Trp138Ter) | CTNS | Pathogenic | 17 | 3558599 | 3558599 | G | A | criteria provided, multiple submitters, no conflicts | ClinGen:CA340259,OMIM:606272.0003 |
Deletion | NC_000017.11:g.3600934_3658165del | CTNS | Pathogenic | 17 | 3504228 | 3561459 | na | na | criteria provided, single submitter | dbVar:nssv3761567,OMIM:606272.0005 |
single nucleotide variant | NM_004937.3(CTNS):c.1015G>A (p.Gly339Arg) | CTNS | Pathogenic | 17 | 3563574 | 3563574 | G | A | criteria provided, multiple submitters, no conflicts | ClinGen:CA278067,UniProtKB:O60931#VAR_010695,OMIM:606272.0015 |
single nucleotide variant | NM_004937.3(CTNS):c.969C>G (p.Asn323Lys) | CTNS | Pathogenic | 17 | 3563268 | 3563268 | C | G | criteria provided, single submitter | ClinGen:CA253164,UniProtKB:O60931#VAR_010288,OMIM:606272.0016 |