Type | Name | Gene Symbol | Clinical Significance | Chromosome | Start | Stop | Reference Allele | Alternate Allele | Review Status | Other IDs |
---|---|---|---|---|---|---|---|---|---|---|
(GRCh37) | ||||||||||
Deletion | NM_001040108.2(MLH3):c.2116del (p.Thr706fs) | MLH3 | Likely pathogenic | 14 | 75514243 | 75514243 | GT | G | criteria provided, single submitter | ClinGen:CA204588 |
single nucleotide variant | NM_000179.3(MSH6):c.4002-1G>A | MSH6 | Likely pathogenic | 2 | 48033917 | 48033917 | G | A | criteria provided, single submitter | ClinGen:CA346761618 |
single nucleotide variant | NM_000179.3(MSH6):c.4002-2A>G | MSH6 | Likely pathogenic | 2 | 48033916 | 48033916 | A | G | criteria provided, multiple submitters, no conflicts | ClinGen:CA10582095 |
Inversion | NM_000179.3(MSH6):c.4002-31_4002-8inv | MSH6 | Pathogenic | 2 | 48033887 | 48033910 | AAACTTTTTTTTTTTTTTTTTTAA | TTAAAAAAAAAAAAAAAAAAGTTT | reviewed by expert panel | - |
single nucleotide variant | NM_000179.3(MSH6):c.4001+2T>C | MSH6 | Pathogenic | 2 | 48033792 | 48033792 | T | C | reviewed by expert panel | ClinGen:CA015138 |
single nucleotide variant | NM_000179.3(MSH6):c.4001+1G>C | MSH6 | Likely pathogenic | 2 | 48033791 | 48033791 | G | C | criteria provided, multiple submitters, no conflicts | ClinGen:CA346761612 |
single nucleotide variant | NM_000179.3(MSH6):c.4001G>A (p.Arg1334Gln) | MSH6 | Pathogenic | 2 | 48033790 | 48033790 | G | A | reviewed by expert panel | ClinGen:CA015202 |
Duplication | NM_000179.3(MSH6):c.3999dup (p.Arg1334fs) | MSH6 | Pathogenic/Likely pathogenic | 2 | 48033785 | 48033786 | A | AT | criteria provided, multiple submitters, no conflicts | ClinGen:CA279676 |
Duplication | NM_000179.3(MSH6):c.3996_4000dup (p.Arg1334fs) | MSH6 | Pathogenic | 2 | 48033784 | 48033785 | T | TATTTC | reviewed by expert panel | ClinGen:CA330585 |
single nucleotide variant | NM_000179.3(MSH6):c.3991C>T (p.Arg1331Ter) | MSH6 | Pathogenic | 2 | 48033780 | 48033780 | C | T | reviewed by expert panel | ClinGen:CA015060 |