Knowledge base for genomic medicine in Japanese
リンチ症候群
腫瘍性疾患
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TypeNameGene SymbolClinical SignificanceChromosomeStartStopReference AlleleAlternate AlleleReview StatusOther IDs
(GRCh37)
single nucleotide variantNM_000535.7(PMS2):c.939T>A (p.Tyr313Ter)PMS2Pathogenic760316536031653ATcriteria provided, single submitter-
DeletionNM_000535.7(PMS2):c.451del (p.Arg151fs)PMS2Pathogenic760421706042170CGCcriteria provided, multiple submitters, no conflicts-
single nucleotide variantNM_000249.4(MLH1):c.1668-2A>CMLH1Pathogenic/Likely pathogenic33708375737083757ACcriteria provided, multiple submitters, no conflicts-
single nucleotide variantNM_000249.4(MLH1):c.1990-1G>CMLH1Pathogenic/Likely pathogenic33709039437090394GCcriteria provided, multiple submitters, no conflicts-
DeletionNM_000251.3(MSH2):c.1510+2_1510+50delMSH2Likely pathogenic24769029547690343GTAAGAATGGGTCATTGGAGGTTGGAATAATTCTTTTGTCTATACACTGTGcriteria provided, single submitter-
DeletionNM_000179.3(MSH6):c.1933del (p.Glu645fs)MSH6Likely pathogenic24802705348027053AGAcriteria provided, single submitter-
DuplicationNM_000179.3(MSH6):c.2124_2126dup (p.Tyr709Ter)MSH6Pathogenic/Likely pathogenic24802724448027245GGAATcriteria provided, multiple submitters, no conflicts-
DuplicationNM_000249.4(MLH1):c.980_983dup (p.His329fs)MLH1Likely pathogenic33706189537061896CCAGCAcriteria provided, single submitter-
DeletionNM_000535.7(PMS2):c.1336_1402del (p.Ser445_Pro446insTer)PMS2Likely pathogenic760269946027060AGGACGCCTTTGTCAGAGATGGCACCTGAAGTGCTAGAAGACAGCATACCCCTTTTCTGTCCTAGAGGAcriteria provided, single submitter-
DeletionNM_000535.7(PMS2):c.1351del (p.Arg451fs)PMS2Likely pathogenic760270456027045CTCcriteria provided, single submitter-