Knowledge base for genomic medicine in Japanese
リンチ症候群
腫瘍性疾患
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TypeNameGene SymbolClinical SignificanceChromosomeStartStopReference AlleleAlternate AlleleReview StatusOther IDs
(GRCh37)
single nucleotide variantNM_000535.7(PMS2):c.1120C>T (p.Gln374Ter)PMS2Pathogenic/Likely pathogenic760294556029455GAcriteria provided, multiple submitters, no conflictsClinGen:CA366742765
DeletionNM_000535.7(PMS2):c.712del (p.Ser238fs)PMS2Pathogenic760370486037048CTCcriteria provided, single submitterClinGen:CA658683475
single nucleotide variantNM_000535.7(PMS2):c.206C>A (p.Ser69Ter)PMS2Pathogenic760436476043647GTcriteria provided, multiple submitters, no conflictsClinGen:CA366744852
DeletionNM_000251.3(MSH2):c.839del (p.Leu280fs)MSH2Pathogenic24764145347641453CTCcriteria provided, single submitterClinGen:CA658683221
single nucleotide variantNM_000179.3(MSH6):c.1135A>T (p.Arg379Ter)MSH6Pathogenic24802625748026257ATcriteria provided, multiple submitters, no conflictsClinGen:CA346742114
DeletionNM_000249.4(MLH1):c.1032del (p.Phe344fs)MLH1Pathogenic/Likely pathogenic33706194837061948TCTcriteria provided, multiple submitters, no conflictsClinGen:CA658683308
single nucleotide variantNM_000249.4(MLH1):c.1918C>A (p.Pro640Thr)MLH1Likely pathogenic33709002937090029CAcriteria provided, multiple submitters, no conflictsClinGen:CA352065629
DeletionNM_000251.3(MSH2):c.845_848del (p.Asp282fs)MSH2Pathogenic/Likely pathogenic24764146047641463GATGAGcriteria provided, multiple submitters, no conflictsClinGen:CA658683222
single nucleotide variantNM_000179.3(MSH6):c.3646+1G>TMSH6Likely pathogenic24803284748032847GTcriteria provided, multiple submitters, no conflictsClinGen:CA346760640
single nucleotide variantNM_000251.3(MSH2):c.2466T>A (p.Cys822Ter)MSH2Likely pathogenic24770784247707842TAcriteria provided, single submitterClinGen:CA46707579