Knowledge base for genomic medicine in Japanese
リンチ症候群
腫瘍性疾患
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TypeNameGene SymbolClinical SignificanceChromosomeStartStopReference AlleleAlternate AlleleReview StatusOther IDs
(GRCh37)
single nucleotide variantNM_000535.7(PMS2):c.2275+1G>TPMS2Pathogenic760182266018226CAcriteria provided, single submitterClinGen:CA366736382
single nucleotide variantNM_000535.7(PMS2):c.2006+1G>CPMS2Likely pathogenic760263896026389CGcriteria provided, single submitterClinGen:CA366738837
DeletionNM_000535.7(PMS2):c.1579del (p.Arg527fs)PMS2Pathogenic760268176026817CTCcriteria provided, single submitterClinGen:CA658655975
single nucleotide variantNM_000535.7(PMS2):c.2353G>T (p.Glu785Ter)PMS2Pathogenic760173116017311CAcriteria provided, multiple submitters, no conflictsClinGen:CA366735869
DeletionNM_000535.7(PMS2):c.748_749del (p.Ser250fs)PMS2Pathogenic760370116037012GGAGcriteria provided, multiple submitters, no conflictsClinGen:CA658657645
DeletionNM_000535.7(PMS2):c.223del (p.Gly74_Val75insTer)PMS2Pathogenic760436306043630ACAcriteria provided, multiple submitters, no conflictsClinGen:CA658657657
DeletionNM_000251.3(MSH2):c.75del (p.Met26fs)MSH2Pathogenic/Likely pathogenic24763040547630405GCGcriteria provided, multiple submitters, no conflictsClinGen:CA658655657
DeletionNM_000251.3(MSH2):c.1208del (p.Asp403fs)MSH2Pathogenic24765701247657012GAGcriteria provided, single submitterClinGen:CA658655668
DuplicationNM_000251.3(MSH2):c.729dup (p.Leu244fs)MSH2Pathogenic24763963447639635CCGcriteria provided, single submitterClinGen:CA658655710
single nucleotide variantNM_000251.3(MSH2):c.1224T>G (p.Tyr408Ter)MSH2Pathogenic/Likely pathogenic24765702847657028TGcriteria provided, multiple submitters, no conflictsClinGen:CA346734084