Knowledge base for genomic medicine in Japanese
リンチ症候群
腫瘍性疾患
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TypeNameGene SymbolClinical SignificanceChromosomeStartStopReference AlleleAlternate AlleleReview StatusOther IDs
(GRCh37)
single nucleotide variantNM_000251.3(MSH2):c.2425G>T (p.Glu809Ter)MSH2Pathogenic/Likely pathogenic24770562547705625GTcriteria provided, multiple submitters, no conflictsClinGen:CA346730246
DeletionNM_000251.3(MSH2):c.2472_2473del (p.Ser825fs)MSH2Pathogenic24770784747707848CAACcriteria provided, single submitterClinGen:CA645372542
single nucleotide variantNM_000251.3(MSH2):c.2656G>T (p.Glu886Ter)MSH2Pathogenic/Likely pathogenic24770993947709939GTcriteria provided, multiple submitters, no conflictsClinGen:CA346731415
DuplicationNM_000179.3(MSH6):c.1571dup (p.Tyr524Ter)MSH6Pathogenic24802669248026693TTAcriteria provided, multiple submitters, no conflictsClinGen:CA645372551
DuplicationNM_000179.3(MSH6):c.2805dup (p.Asp936Ter)MSH6Pathogenic24802792648027927CCTcriteria provided, multiple submitters, no conflictsClinGen:CA645372553
single nucleotide variantNM_000179.3(MSH6):c.2905T>C (p.Tyr969His)MSH6Likely pathogenic24802802748028027TCcriteria provided, single submitterClinGen:CA346756128
DeletionNM_000179.3(MSH6):c.3220_3221del (p.Met1074fs)MSH6Pathogenic24803060548030606CTACcriteria provided, multiple submitters, no conflictsClinGen:CA645372554
DuplicationNM_000179.3(MSH6):c.3850dup (p.Thr1284fs)MSH6Pathogenic/Likely pathogenic24803363848033639TTAcriteria provided, multiple submitters, no conflictsClinGen:CA645372555
DuplicationNM_000179.3(MSH6):c.3917_3938dup (p.Ile1313_Gln1314insTer)MSH6Likely pathogenic24803370548033706GGCTAATCTCCCAGAGGAAGTTATcriteria provided, single submitterClinGen:CA645372556
DuplicationNM_000179.3(MSH6):c.3922_3940dup (p.Gln1314fs)MSH6Pathogenic24803371048033711TTCTCCCAGAGGAAGTTATTCcriteria provided, multiple submitters, no conflictsClinGen:CA645372557