Type | Name | Gene Symbol | Clinical Significance | Chromosome | Start | Stop | Reference Allele | Alternate Allele | Review Status | Other IDs |
---|---|---|---|---|---|---|---|---|---|---|
(GRCh37) | ||||||||||
single nucleotide variant | NM_000179.3(MSH6):c.3647-2A>C | MSH6 | Pathogenic | 2 | 48033341 | 48033341 | A | C | reviewed by expert panel | ClinGen:CA013656 |
Deletion | NM_000179.3(MSH6):c.3647-6_3647-1del | MSH6 | Likely pathogenic | 2 | 48033337 | 48033342 | TTAACAG | T | reviewed by expert panel | ClinGen:CA330546 |
Duplication | NM_000179.3(MSH6):c.3678_3706dup (p.Ala1236delinsGluTer) | MSH6 | Pathogenic | 2 | 48033373 | 48033374 | C | CAATAGCAAATGCAGTTGTTAAAGAACTTG | reviewed by expert panel | ClinGen:CA330551 |
Deletion | NM_000179.3(MSH6):c.3724_3726del (p.Arg1242del) | MSH6 | Likely pathogenic | 2 | 48033418 | 48033420 | TGTC | T | reviewed by expert panel | ClinGen:CA013989 |
Deletion | NM_000179.3(MSH6):c.3725_3737del (p.Arg1242fs) | MSH6 | Pathogenic | 2 | 48033419 | 48033431 | GTCGTACATTATTT | G | reviewed by expert panel | ClinGen:CA014056 |
Duplication | NM_000179.3(MSH6):c.3729_3732dup (p.Phe1245fs) | MSH6 | Pathogenic | 2 | 48033424 | 48033425 | C | CATTA | reviewed by expert panel | ClinGen:CA330562 |
Insertion | NM_000179.3(MSH6):c.3757_3758insA (p.Val1253fs) | MSH6 | Pathogenic | 2 | 48033453 | 48033454 | G | GA | reviewed by expert panel | ClinGen:CA014173 |
single nucleotide variant | NM_000179.3(MSH6):c.3768T>G (p.Tyr1256Ter) | MSH6 | Pathogenic | 2 | 48033464 | 48033464 | T | G | reviewed by expert panel | ClinGen:CA014232 |
single nucleotide variant | NM_000179.3(MSH6):c.3772C>T (p.Gln1258Ter) | MSH6 | Pathogenic | 2 | 48033468 | 48033468 | C | T | reviewed by expert panel | ClinGen:CA014244 |
Deletion | NM_000179.3(MSH6):c.3798_3801+26del | MSH6 | Pathogenic | 2 | 48033491 | 48033520 | GACATATGGTATGTGCAAATTGTTTTTTTCC | G | reviewed by expert panel | ClinGen:CA330569 |