Knowledge base for genomic medicine in Japanese
リンチ症候群
腫瘍性疾患
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TypeNameGene SymbolClinical SignificanceChromosomeStartStopReference AlleleAlternate AlleleReview StatusOther IDs
(GRCh37)
single nucleotide variantNM_000535.7(PMS2):c.23+1G>TPMS2Pathogenic/Likely pathogenic760486276048627CAcriteria provided, multiple submitters, no conflictsClinGen:CA011233
DuplicationNM_000179.3(MSH6):c.3476dup (p.Tyr1159Ter)MSH6Pathogenic24803208548032086TTAcriteria provided, multiple submitters, no conflictsClinGen:CA166781
DeletionNM_000179.3(MSH6):c.626_627+15delMSH6Pathogenic24802320048023216GGAGGTGGGACACGGCAAGcriteria provided, single submitterClinGen:CA167078
DeletionNM_000249.4(MLH1):c.984_997del (p.His329fs)MLH1Pathogenic/Likely pathogenic33706189637061909CAGCAGCACATCGAGCcriteria provided, multiple submitters, no conflictsClinGen:CA013439
DuplicationNM_000179.3(MSH6):c.2779dup (p.Ile927fs)MSH6Pathogenic24802790048027901TTAcriteria provided, multiple submitters, no conflictsClinGen:CA010899
DuplicationNM_000179.3(MSH6):c.3980dup (p.Asn1327fs)MSH6Pathogenic24803376748033768GGAcriteria provided, multiple submitters, no conflictsClinGen:CA014981
single nucleotide variantNM_000535.7(PMS2):c.2007-2A>CPMS2Pathogenic760226246022624TGcriteria provided, multiple submitters, no conflictsClinGen:CA010693
single nucleotide variantNM_000251.3(MSH2):c.792+2T>CMSH2Likely pathogenic24763970147639701TCcriteria provided, single submitterClinGen:CA022278
DuplicationNM_000251.3(MSH2):c.124_127dup (p.Tyr43fs)MSH2Pathogenic24763045347630454CCTTCTcriteria provided, single submitterClinGen:CA017606
single nucleotide variantNM_000251.3(MSH2):c.1568T>C (p.Phe523Ser)MSH2Likely pathogenic24769385447693854TCcriteria provided, single submitterClinGen:CA018632