Type | Name | Gene Symbol | Clinical Significance | Chromosome | Start | Stop | Reference Allele | Alternate Allele | Review Status | Other IDs |
---|---|---|---|---|---|---|---|---|---|---|
(GRCh37) | ||||||||||
Deletion | NM_000251.3(MSH2):c.94_103del (p.Thr32fs) | MSH2 | Pathogenic | 2 | 47630423 | 47630432 | CCACCACAGTG | C | reviewed by expert panel | ClinGen:CA022560 |
Duplication | NM_000251.3(MSH2):c.958dup (p.Thr320fs) | MSH2 | Pathogenic | 2 | 47643449 | 47643450 | T | TA | reviewed by expert panel | ClinGen:CA022621 |
single nucleotide variant | NM_000251.3(MSH2):c.970C>T (p.Gln324Ter) | MSH2 | Pathogenic | 2 | 47643462 | 47643462 | C | T | reviewed by expert panel | ClinGen:CA022678 |
Deletion | NM_000251.3(MSH2):c.970_971del (p.Gln324fs) | MSH2 | Pathogenic | 2 | 47643462 | 47643463 | TCA | T | reviewed by expert panel | ClinGen:CA022671 |
Insertion | NM_000251.2(MSH2):c.970_971ins4 | MSH2 | Pathogenic | 2 | 47643462 | 47643463 | na | na | reviewed by expert panel | - |
Duplication | NM_000251.3(MSH2):c.973dup (p.Ser325fs) | MSH2 | Pathogenic | 2 | 47643464 | 47643465 | G | GT | reviewed by expert panel | ClinGen:CA022687 |
single nucleotide variant | NM_000251.3(MSH2):c.989T>C (p.Leu330Pro) | MSH2 | Pathogenic | 2 | 47643481 | 47643481 | T | C | reviewed by expert panel | ClinGen:CA022706 |
single nucleotide variant | NM_000251.3(MSH2):c.997T>C (p.Cys333Arg) | MSH2 | Pathogenic | 2 | 47643489 | 47643489 | T | C | criteria provided, multiple submitters, no conflicts | ClinGen:CA022717 |
single nucleotide variant | NM_000251.3(MSH2):c.998G>A (p.Cys333Tyr) | MSH2 | Pathogenic | 2 | 47643490 | 47643490 | G | A | reviewed by expert panel | ClinGen:CA022722,UniProtKB:P43246#VAR_043759 |
Deletion | NM_000535.5(PMS2):c.(?_-87)_1144+?del | PMS2 | Pathogenic | 7 | 6029431 | 6048737 | na | na | reviewed by expert panel | - |