Type | Name | Gene Symbol | Clinical Significance | Chromosome | Start | Stop | Reference Allele | Alternate Allele | Review Status | Other IDs |
---|---|---|---|---|---|---|---|---|---|---|
(GRCh37) | ||||||||||
single nucleotide variant | NM_000251.3(MSH2):c.645+1G>A | MSH2 | Pathogenic | 2 | 47637512 | 47637512 | G | A | reviewed by expert panel | ClinGen:CA021643 |
single nucleotide variant | NM_000251.3(MSH2):c.645+1G>T | MSH2 | Likely pathogenic | 2 | 47637512 | 47637512 | G | T | reviewed by expert panel | ClinGen:CA021649 |
Deletion | NM_000251.1(MSH2):c.645+539_1077-3451del | MSH2 | Pathogenic | 2 | 47638050 | 47653430 | na | na | reviewed by expert panel | - |
Deletion | NM_000251.1(MSH2):c.645+791_1076+4894del | MSH2 | Pathogenic | 2 | 47638302 | 47648462 | na | na | reviewed by expert panel | - |
Deletion | NM_000251.1(MSH2):c.645+967_1076+5075del | MSH2 | Pathogenic | 2 | 47638478 | 47648643 | na | na | reviewed by expert panel | - |
single nucleotide variant | NM_000251.3(MSH2):c.646-2A>G | MSH2 | Likely pathogenic | 2 | 47639551 | 47639551 | A | G | reviewed by expert panel | ClinGen:CA021672 |
single nucleotide variant | NM_000251.3(MSH2):c.646-3T>G | MSH2 | Pathogenic | 2 | 47639550 | 47639550 | T | G | reviewed by expert panel | ClinGen:CA021679 |
Deletion | NM_000251.3(MSH2):c.646-3_654del | MSH2 | Likely pathogenic | 2 | 47639548 | 47639559 | AAATAGATAATTC | A | reviewed by expert panel | ClinGen:CA331656 |
Deletion | NM_000251.1(MSH2):c.646-?_(*272_?)del | MSH2 | Pathogenic | 2 | 47639553 | 47710360 | na | na | reviewed by expert panel | - |
Deletion | NM_000251.3(MSH2):c.650_654del (p.Ile217fs) | MSH2 | Pathogenic | 2 | 47639555 | 47639559 | TAATTC | T | reviewed by expert panel | ClinGen:CA021704 |