Knowledge base for genomic medicine in Japanese
リンチ症候群
腫瘍性疾患
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TypeNameGene SymbolClinical SignificanceChromosomeStartStopReference AlleleAlternate AlleleReview StatusOther IDs
(GRCh37)
single nucleotide variantNM_000251.3(MSH2):c.488T>G (p.Val163Gly)MSH2Pathogenic24763735447637354TGreviewed by expert panelClinGen:CA021209,UniProtKB:P43246#VAR_022670
single nucleotide variantNM_000251.3(MSH2):c.490G>A (p.Gly164Arg)MSH2Pathogenic24763735647637356GAreviewed by expert panelClinGen:CA021212,UniProtKB:P43246#VAR_043749
single nucleotide variantNM_000251.3(MSH2):c.490G>T (p.Gly164Trp)MSH2Pathogenic/Likely pathogenic24763735647637356GTcriteria provided, multiple submitters, no conflictsClinGen:CA021215
single nucleotide variantNM_000251.3(MSH2):c.493T>G (p.Tyr165Asp)MSH2Likely pathogenic24763735947637359TGreviewed by expert panelClinGen:CA021222,UniProtKB:P43246#VAR_067284
DeletionNM_000251.3(MSH2):c.506_509del (p.Ile169fs)MSH2Pathogenic24763737047637373CCATACreviewed by expert panelClinGen:CA021243
single nucleotide variantNM_000251.3(MSH2):c.508C>T (p.Gln170Ter)MSH2Pathogenic24763737447637374CTreviewed by expert panelClinGen:CA021248
DuplicationNM_000251.3(MSH2):c.511_583dup (p.Gly195delinsGluGluThrArgThrValTer)MSH2Pathogenic24763737547637376AAGAGGAAACTAGGACTGTGTGAATTCCCTGATAATGATCAGTTCTCCAATCTTGAGGCTCTCCTCATCCAGATTreviewed by expert panelClinGen:CA331612
DeletionNM_000251.3(MSH2):c.513del (p.Lys172fs)MSH2Pathogenic24763737847637378AGAreviewed by expert panelClinGen:CA021260
single nucleotide variantNM_000251.3(MSH2):c.518T>C (p.Leu173Pro)MSH2Likely pathogenic24763738447637384TCcriteria provided, multiple submitters, no conflictsClinGen:CA021269,UniProtKB:P43246#VAR_043751
single nucleotide variantNM_000251.3(MSH2):c.518T>G (p.Leu173Arg)MSH2Pathogenic24763738447637384TGreviewed by expert panelClinGen:CA021275