Knowledge base for genomic medicine in Japanese
家族性高コレステロール血症
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TypeNameGene SymbolClinical SignificanceChromosomeStartStopReference AlleleAlternate AlleleReview StatusOther IDs
(GRCh37)
copy number lossGRCh38/hg38 19p13.2(chr19:11102663-11107515)x1LDLRPathogenic191121333911218191nanacriteria provided, single submitter-
copy number lossGRCh38/hg38 19p13.2(chr19:11100222-11102787)x1LDLRPathogenic191121089811213463nanacriteria provided, single submitter-
copy number gainGRCh37/hg19 19p13.2(chr19:11210898-11218191)x3LDLRLikely pathogenic191121089811218191nanacriteria provided, single submitter-
single nucleotide variantNM_000384.3(APOB):c.11789-1G>CAPOBLikely pathogenic22122754821227548CGcriteria provided, single submitter-
DeletionNM_000384.3(APOB):c.6543del (p.Phe2181fs)APOBPathogenic/Likely pathogenic22123319721233197CACcriteria provided, multiple submitters, no conflicts-
single nucleotide variantNM_000384.3(APOB):c.4503T>G (p.Tyr1501Ter)APOBPathogenic22123523721235237ACcriteria provided, single submitter-
DeletionNC_000019.10:g.(?_11120072)_(11120608_?)delLDLRPathogenic191123074811231284nanacriteria provided, single submitter-
DeletionNC_000019.10:g.(?_11123154)_(11131359_?)delLDLRPathogenic191123383011242035nanacriteria provided, single submitter-
DeletionNC_000019.10:g.(?_11127988)_(11128105_?)delLDLRPathogenic191123866411238781nanacriteria provided, single submitter-
single nucleotide variantNM_000527.5(LDLR):c.974G>T (p.Cys325Phe)LDLRLikely pathogenic191122136111221361GTcriteria provided, multiple submitters, no conflicts-