Type | Name | Gene Symbol | Clinical Significance | Chromosome | Start | Stop | Reference Allele | Alternate Allele | Review Status | Other IDs |
---|---|---|---|---|---|---|---|---|---|---|
(GRCh37) | ||||||||||
Deletion | NM_001040108.2(MLH3):c.2116del (p.Thr706fs) | MLH3 | Likely pathogenic | 14 | 75514243 | 75514243 | GT | G | criteria provided, single submitter | ClinGen:CA204588 |
Deletion | NM_000179.2(MSH6):c.3557-?_(*93_?)del | MSH6 | Pathogenic | 2 | 48032167 | 48034093 | na | na | reviewed by expert panel | - |
Deletion | NM_000179.2(MSH6):c.(?_-152)_(*93_?)del | MSH6 | Pathogenic | 2 | 48010221 | 48034092 | na | na | reviewed by expert panel | - |
Deletion | NC_000002.12:g.(?_47783224)_(47806870_?)del | MSH6 | Pathogenic | 2 | 48010363 | 48034009 | na | na | criteria provided, single submitter | - |
Deletion | NC_000002.12:g.(?_47783228)_(47806866_?)del | MSH6 | Pathogenic | 2 | 48010367 | 48034005 | na | na | criteria provided, single submitter | - |
Deletion | Single allele | MSH6 | Pathogenic | 2 | 48010373 | 48033999 | na | na | criteria provided, single submitter | - |
single nucleotide variant | NM_000179.3(MSH6):c.4002-1G>A | MSH6 | Likely pathogenic | 2 | 48033917 | 48033917 | G | A | criteria provided, single submitter | ClinGen:CA346761618 |
single nucleotide variant | NM_000179.3(MSH6):c.4002-2A>G | MSH6 | Likely pathogenic | 2 | 48033916 | 48033916 | A | G | criteria provided, multiple submitters, no conflicts | ClinGen:CA10582095 |
Inversion | NM_000179.3(MSH6):c.4002-31_4002-8inv | MSH6 | Pathogenic | 2 | 48033887 | 48033910 | AAACTTTTTTTTTTTTTTTTTTAA | TTAAAAAAAAAAAAAAAAAAGTTT | reviewed by expert panel | - |
single nucleotide variant | NM_000179.3(MSH6):c.4001+2T>C | MSH6 | Pathogenic | 2 | 48033792 | 48033792 | T | C | reviewed by expert panel | ClinGen:CA015138 |